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| Shortstops Career Stolen Bases Leaderboard | |
| * - Indicates Hall of Fame Bold - Indicates active player |
| Rank | Player | Stolen Bases | PA | Years | Single Season Leaderboard |
| 1. | Michael Koo Jr * | 1257 | 12588 | 2000-2019 | |
| 2. | Matt McQuade * | 1251 | 10532 | 2003-2020 | |
| 3. | Gandalf Greyheme * | 1000 | 11069 | 2003-2020 | |
| 4. | Mark Delia * | 994 | 11162 | 2000-2018 | |
| 5. | Jason Kroner * | 652 | 10707 | 2000-2018 | |
| 6. | Rudy Lareau | 647 | 7843 | 2010-2025 | |
| 7. | Tanner Chayse * | 567 | 11089 | 2000-2017 | |
| 8. | Joseph Gardiner | 383 | 7992 | 2008-2022 | |
| 9. | Willie Tyler | 372 | 4174 | 2003-2018 | |
| 10. | Mark Risch | 285 | 2452 | 2000-2013 | |
| 11. | Marquez Revolario | 262 | 2020 | 2026-2029 | |
| 12. | Steven Wynn | 230 | 4964 | 2000-2012 | |
| 13. | Santo Tedesco | 227 | 6445 | 2019-2029 | |
| 14. | Al Beaudoin | 224 | 2382 | 2024-2029 | |
| 15. | Robert Wyatt | 206 | 4949 | 2001-2011 | |
| 16. | Alex Sullins | 199 | 8750 | 2011-2025 | |
| 17. | John McDonald | 198 | 7704 | 2005-2018 | |
| 18. | Norman Bates | 196 | 10477 | 2002-2020 | |
| 19. | Donald Toman | 186 | 5643 | 2004-2015 | |
| 20. | Cipri Font | 170 | 4610 | 2012-2022 | |
| 21. | Matthew Courtney | 158 | 3421 | 2015-2026 | |
| 22. | Bill Prosser | 157 | 2742 | 2016-2029 | |
| 23. | James Evenson | 156 | 5017 | 2019-2029 | |
| 24. | Louis Woods | 129 | 1170 | 2004-2012 | |
| 25. | James Hendricks | 123 | 4586 | 2000-2008 | |
| 26. | Ramone Arais | 122 | 3330 | 2023-2029 | |
| 27. | Manuel Talamantez | 115 | 5737 | 2005-2017 | |
| 28. | Chris Lott | 114 | 8546 | 2005-2018 | |
| 29. | Garry Piccirillo | 112 | 2677 | 2000-2004 | |
| 30. | Joseph Tucker | 109 | 1368 | 2002-2008 | |
| 31. | Mitch Nickle | 105 | 2338 | 2003-2013 | |
| 32. | Robert Petro | 103 | 5406 | 2016-2029 | |
| 33. | Jerry Pyne | 101 | 1803 | 2000-2004 | |
| 34. | Hector Castruita | 95 | 2447 | 2020-2029 | |
| 35. | Ethan Kennedy | 88 | 2803 | 2023-2029 | |
| 36. | Luther Shelton | 86 | 2078 | 2020-2029 | |
| David Bowers | 86 | 3463 | 2011-2022 | ||
| 38. | Jose Decambra | 83 | 6444 | 2009-2021 | |
| 39. | Carlos Gomez | 82 | 3805 | 2003-2013 | |
| 40. | Jerrold Dukes | 80 | 9087 | 2008-2024 | |
| 41. | Mark Hall | 79 | 7290 | 2011-2023 | |
| 42. | Leon Rego | 69 | 1577 | 2012-2021 | |
| 43. | Carol Hoover | 68 | 2507 | 2000-2008 | |
| 44. | Charlie Bench | 66 | 1378 | 2026-2029 | |
| 45. | Albert Cepeda | 65 | 4170 | 2000-2010 | |
| 46. | Tony Luna | 58 | 4525 | 2013-2023 | |
| 47. | Bob Duran | 57 | 3226 | 2023-2029 | |
| 48. | Kiyo Yazuka | 56 | 807 | 2004-2012 | |
| 49. | Zack Loranger | 54 | 3339 | 2010-2019 | |
| 50. | Jacinto Rios | 51 | 1012 | 2000-2007 | |
| 51. | Fred Haigney | 48 | 3866 | 2023-2029 | |
| Rafael Pocovi | 48 | 3671 | 2024-2029 | ||
| Matthew Maglio | 48 | 7035 | 2005-2019 | ||
| 54. | Timothy Montag | 45 | 4444 | 2007-2015 | |
| Benjamin Vasquez | 45 | 3503 | 2000-2008 | ||
| 56. | Wendell Granger | 43 | 1946 | 2000-2004 | |
| 57. | Lester Griffey | 42 | 5401 | 2013-2029 | |
| Angelo De Leon | 42 | 1850 | 2018-2025 | ||
| 59. | Flyswatter Pentecost | 41 | 5196 | 2020-2029 | |
| Blake Rigsby | 41 | 880 | 2025-2029 | ||
| 61. | James Ibanez | 40 | 2343 | 2000-2006 | |
| 62. | Javiero Arivizu | 39 | 620 | 2027-2029 | |
| Cecil Naranjo | 39 | 1050 | 2008-2017 | ||
| Francisco Magana | 39 | 2648 | 2000-2003 | ||
| 65. | Robert Kidder | 38 | 1052 | 2000-2005 | |
| 66. | Everett Shippee | 36 | 1802 | 2027-2029 | |
| 67. | Earl McEvoy | 34 | 2266 | 2022-2029 | |
| Andrew Brown | 34 | 7828 | 2001-2016 | ||
| 69. | Pat Eckard | 33 | 2088 | 2025-2029 | |
| Natanael Posso | 33 | 1041 | 2022-2029 | ||
| Lazlo Szabonagy | 33 | 6993 | 2005-2021 | ||
| 72. | Geraldo Gutierrez | 32 | 1729 | 2000-2011 | |
| 73. | Andrew Updike | 31 | 786 | 2018-2026 | |
| Richard Tasker | 31 | 4861 | 2004-2017 | ||
| 75. | Sherm Allred | 30 | 2764 | 2016-2029 | |
| 76. | Archy Miller Jr | 29 | 7926 | 2006-2024 | |
| Leo Ryan | 29 | 3202 | 2000-2010 | ||
| 78. | Tommy Crumbley | 28 | 858 | 2012-2020 | |
| 79. | Jeff Magee | 27 | 4521 | 2017-2029 | |
| Ron Salas | 27 | 2333 | 2023-2029 | ||
| Robert Day | 27 | 510 | 2000-2002 | ||
| 82. | Miguel Cobos | 26 | 1276 | 2018-2020 | |
| Bill Lanctot | 26 | 2352 | 2000-2012 | ||
| Patrick Cleek | 26 | 2768 | 2000-2007 | ||
| 85. | Jeremy Austin | 24 | 2614 | 2023-2029 | |
| Kyle Warner | 24 | 2227 | 2021-2027 | ||
| 87. | Kenneth Scurry | 22 | 662 | 2029-2029 | |
| Jarvis Gilligan | 22 | 957 | 2001-2013 | ||
| 89. | Jarrod Jennings | 21 | 1419 | 2018-2023 | |
| 90. | Luis Ortiz | 20 | 8272 | 2015-2029 | |
| Bob Jahn | 20 | 3294 | 2015-2020 | ||
| Zack Sealey | 20 | 387 | 2015-2020 | ||
| Bradley Davis | 20 | 1839 | 2000-2003 | ||
| 94. | Malachi Stroble | 18 | 1583 | 2023-2029 | |
| 95. | Mark Vanman | 17 | 3355 | 2020-2029 | |
| Scott Welch | 17 | 598 | 2028-2029 | ||
| Red Rother | 17 | 1112 | 2007-2008 | ||
| 98. | Lesley Hamm | 15 | 2173 | 2024-2029 | |
| Arturo Esquiuel | 15 | 1927 | 2027-2029 | ||
| Benedicto Ramos | 15 | 1068 | 2021-2029 |
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